From: "Michael R. Crusoe" <crusoe@debian.org>
Date: Thu, 21 Nov 2024 13:43:00 +0100
Subject: Update paths to their Debian equivalents

Forwarded: not-needed
---
 apps/ngs_roi/README | 5 +++--
 1 file changed, 3 insertions(+), 2 deletions(-)

diff --git a/apps/ngs_roi/README b/apps/ngs_roi/README
index dfaa67e..267a3a3 100644
--- a/apps/ngs_roi/README
+++ b/apps/ngs_roi/README
@@ -29,7 +29,8 @@ ordering of the genome.
 ------------------------------------------------------------------------------
 
 You can find the binaries bam2roi, roi_feature_projection, and
-roi_plot_thumbnails in the directory "bin" and the example files in "example".
+roi_plot_thumbnails in the directory /usr/lib/seqan/bin/ and the example files
+in /usr/share/doc/seqan-apps/ngs_roi/example/.
 
 The following examples require a Unix environment such as Linux or Mac Os X.
 
@@ -97,7 +98,7 @@ record.
 
 The ROI file and the BED file have be sorted by coordinate (lexicographically
 reference names, then by begin and end position).  You will find the script
-sort_bed.sh in the subdirectory bin.  We first use it to sort the BED file
+bed_sort.sh in /usr/lib/seqan/bin/.  We first use it to sort the BED file
 appropriately.
 
   $ head -5 dmel.bed
